My Mac Setup

Super cool command line tools

  1. https://github.com/yudai/gotty - share command line utilities with a webserver

Workflows and organization

  • Patterns for Research In Machine Learning - I saw this article linked on a reddit thread.
  • Cookie Cutter - useful templates for initializing project directories. There is a data science template.
  • Sacred - a tool for tracking computational experiments. I am not sure how this tool complements Snakemake/Makefiles and friends. Presumably, I don't want to manually keep track of all configurations in a snakemake config.yaml file.
  • comet.ml is a for-profit alternative to Sacred for tracking model training experiments.
  • computer/start.txt
  • Last modified: 2018/08/18 22:26
  • by admin